ryan mcdonald LinkedIn Scholar

I am interested in language technologies. The core algorithms and models used in intelligent agents, machine translation and information retrieval and synthesis.

Currently I am investing in and consulting with various AI companies in areas ranging from scientific simulation to autonomous task solving.

Previously, I was Chief Scientist at ASAPP, a research scientist at Google and I completed my PhD at the University of Pennsylvania.

Google Scholar

• Discriminative Training and Spanning Tree Algorithms for Dependency Parsing
  University of Pennsylvania, July 2006.
  Supervisor: Fernando Pereira
  Committee: Eugene Charniak (external), Aravind Joshi, Mark Liberman, and Mitch Marcus (chair)
  [PDF]
  
  

• SteP: Stacked LLM Policies for Web Actions
  P Sodhi, S.R.K. Branavan, Y Artzi, R McDonald
  Conference on Language Modeling (COLM 2024)
  [PDF]
  Original: HeaP: Hierarchical Policies for Web Actions using LLMs (link)
  
  

• Multi-Step Dialogue Workflow Action Prediction
  R. Ramakrishnan, E. Elenberg, H. Narangodage, R. McDonald
  Arxiv
  [PDF]
  
  
• On the Effectiveness of Offline RL for Dialogue Response Generation
  P Sodhi, F Wu, ER Elenberg, KQ Weinberger, R McDonald
  International Conference on Machine Learning (ICML 2023)
  [PDF]
  
  
• Wav2Seq: Pre-training Speech-to-Text Encoder-Decoder Models Using Pseudo Languages
  F Wu, K Kim, S Watanabe, K Han, R McDonald, KQ Weinberger, Y Artzi
  IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP 2023)
  [PDF]
  
  

• Long-term Control for Dialogue Generation: Methods and Evaluation
  R Ramakrishnan, HB Narangodage, M Schilman, KQ Weinberger, R McDonald
  Proceedings of the North American Chapter of the Association for Computational Linguistics (NAACL 2022)
  [PDF]
  
  
• Decoding Part-of-Speech from human EEG signals
  A Murphy, B Bohnet, RT Mcdonald, U Noppeney
  Proceedings of the Association for Computational Linguistics (ACL 2022)
  [PDF]
  
  

• Planning with Learned Entity Prompts for Abstractive Summarization
  S Narayan, Y Zhao, J Maynez, G Simoes, V Nikolaev and R McDonald
  Transactions of the Association for Computational Linguistics (TACL), 2021
  [PDF][preprints]
  
  
• Leveraging Type Descriptions for Zero-shot Named Entity Recognition and Classification
  R. Aly, A. Vlachos and R. McDonald∗
  Proceedings of the Association for Computational Linguistics (ACL 2021)
  [PDF]
  
  
• Focus Attention: Promoting Faithfulness and Diversity in Summarization
  R. Aralikatte, S. Narayan, J. Maynez, S. Rothe and R. McDonald∗
  Proceedings of the Association for Computational Linguistics (ACL 2021)
  [PDF]
  
  
• Zero-shot Neural Passage Retrieval via Domain-targeted Synthetic Question Generation
  J. Ma, I. Korotkov, Y. Yang, K. Hall and R. McDonald
  Proceedings of the European Association for Computational Linguistics (EACL 2021)
  [PDF]
  
  

• RRF102: Meeting the TREC-COVID Challenge with a 100+ Runs Ensemble
  M. Bendersky, H. Zhuang, J. Ma, S. Han, K. Hall and R. McDonald
  arXiv
  [PDF]
  
  
• Stepwise Extractive Summarization and Planning with Structured Transformers
  S. Narayan*, J. Maynez*, J. Adamek, D. Pighin, B. Bratanic and R. McDonald
  Proceedings of the Conference on Empirical Methods in Natural Language Processing (EMNLP 2020)
  [PDF]
  
  
• Hybrid First-stage Retrieval Models for Biomedical Literature
  J. Ma, I. Korotkov, K. Hall, R. McDonald
  BioASQ (2020)
  [PDF]
  
  
• On Faithfulness and Factuality in Abstractive Summarization
  J. Maynez*, S. Narayan*, B. Bohnet, R.McDonald
  Proceedings of the Annual Association for Computational Linguistics (ACL 2020)
  [PDF][DATA]
  
  
• Zero-shot Neural Retrieval via Domain-targeted Synthetic Query Generation
  J. Ma, I. Korotkov, Y. Yang, K. Hall and R. McDonald
  arXiv pre-print
  [pre-print PDF][Published EACL 2021 PDF]
  
  
• QURIOUS: Question Generation Pretraining for Text Generation
  S. Narayan, G. Simoes, J. Ma, H. Craighead, R McDonald
  arXiv
  [PDF]
  
  
• BioMRC: A Dataset for Biomedical Machine Reading Comprehension
  P. Stavropoulos, D. Pappas, I. Androutsopoulos and R. McDonald
  Proceedings of the 19th Workshop on Biomedical Natural Language Processing (BioNLP 2020)
  [PDF]
  
  

• Embedding Biomedical Ontologies by Jointly Encoding Network Structure and Textual Node Descriptors
  S. Kotitsas, D. Pappas, I. Androutsopoulos, R. McDonald and M. Apidianaki
  Proceedings of the 18th Workshop on Biomedical Natural Language Processing (BioNLP 2019)
  [PDF]
  
  
• Measuring Domain Portability and Error Propagation in Biomedical QA
  S. Hosein, D. Andor and R. McDonald
  Prroceedings of the 7th BioASQ Workshop, 2019.
  [PDF]
  
  
• AUEB at BioASQ 7: Document and Snippet Retrieval
  D. Pappas, G. Brokos, R. McDonald, I. Androutsopoulos
  Prroceedings of the 7th BioASQ Workshop, 2019.
  [PDF]
  
  

• Deep Relevance Ranking Using Enhanced Document-Query Interactions
  R. McDonald, G. Brokos and I. Androutsopoulos
  Proceedings of the Conference on Empirical Methods in Natural Language Processing (EMNLP), 2018.
  [PDF] [appendix]
  
  
• AUEB at BioASQ 6: Document and Snippet Retrieval
  G. Brokos, P. Liosis, R. McDonald, D. Pappas and I. Androutsopoulos
  Proceedings of the 6th BioASQ Workshop, 2018.
  [PDF]
  
  
• Morphosyntactic Tagging with a Meta-BiLSTM Model over Context Sensitive Token Encodings
  B. Bohnet et al.
  Proceedings of the Association for Computational Linguistics (ACL), 2018.
  [PDF]
  
  

• Natural Language Processing with Small Feed-Forward Networks
  J. Botha et al.
  Empirical Methods in Natural Language Processing (EMNLP), 2017.
  [PDF]
  
  

• Generalized Transition-based Dependency Parsing via Control Parameters
  B. Bohnet, R. McDonald, E. Pitler and J. Ma
  Proceedings of the Association for Computational Linguistics (ACL), 2016.
  [PDF]
  
  
• Universal dependencies v1: A multilingual treebank collection
  J. Nivre et. al.
  Proceedings of the International Conference on Language Resources and Evaluation (LREC), 2016.
  [PDF]
  
  
• Morpho-syntactic Lexicon Generation Using Graph-based Semi-supervised Learning
  M. Faruqui, R. McDonald, and R. Soricut
  Transactions of the Association for Computational Linguistics (TACL), 2016.
  [PDF]
  
  

• A Linear-Time Transition System for Crossing Interval Trees
  E. Pitler and R. McDonald
  North American Association for Computational Linguistics (NAACL), 2015.
  [PDF]
  
  

• Adapting Taggers to Twitter with (Less) Distant Supervision
  B. Plank, D. Hovy, R. McDonald and A. Søgaard
  International Conference on Computational Linguistics (COLING), 2014.
  [PDF]
  
  
• Enforcing Structural Diversity in Cube-pruned Dependency Parsing
  H. Zhang and R. McDonald
  Association for Computational Linguistics (ACL), 2014.
  [PDF]
  
  
• Constrained Arc-Eager Dependency Parsing
  J. Nivre, Y. Goldberg and R. McDonald
  Computational Linguistics (Squib), ?:?, 2014.
  [PDF]
  
  

• Online Learning for Inexact Hypergraph Search
  H. Zhang, L.Huang, K. Zhao and R. McDonald
  Empirical Methods in Natural Language Processing (EMNLP), 2013.
  [PDF]
  
  
• Universal Dependency Annotation for Multilingual Parsing
  R. McDonald, J. Nivre, Y. Quirmbach-Brundage, Y. Goldberg, D. Das, K. Ganchev, K. Hall, S. Petrov, H. Zhang, O. Täckström, C. Bedini, N. Bertomeu Castello and J. Lee
  Association of Computational Linguistics (ACL), 2013.
  [PDF][DATA]
  
  
• Token and Type Constraints for Cross-Lingual Part-of-Speech Tagging
  O. Täckström, D. Das, S. Petrov, R. McDonald and J. Nivre
  Transactions of the Association for Computational Linguistics 1(2013):1-12.
  Presented at ACL, 2013.
  [PDF]
  
  
• Target Language Adaptation of Discriminative Transfer Parsers
  O. Täckström, R. McDonald and J. Nivre
  North American Association for Computational Linguistics (NAACL), 2013.
  [PDF]
  
  

• Generalized Higher-Order Dependency Parsing with Cube Pruning
  H. Zhang and R. McDonald
  Empirical Methods in Natural Language Processing
  and Computational Natural Language Learning (EMNLP-CoNLL), 2012.
  [PDF]
  
  
• Overview of the 2012 Shared Task on Parsing the Web
  S. Petrov and R. McDonald
  Notes of the First Workshop on Syntactic Analysis of Non-Canonical Language (SANCL), 2012.
  [PDF]
  
  
• Using Search-Logs to Improve Query Tagging
  K. Ganchev, K. Hall, R. McDonald and S. Petrov
  Association for Computational Linguistics (ACL), 2012.
  [PDF]
  
  
• Cross-lingual Word Clusters for Direct Transfer of Linguistic Structure
  O. Täckström, R. McDonald and J. Uszkoreit
  North American Association for Computational Linguistics (NAACL), 2012.
  [Best student paper award]
  [PDF]
  
  
• A Universal Part-of-Speech Tagset
  S. Petrov, D. Das and R. McDonald
  International Conference on Language Resources and Evaluation (LREC), 2012
  [PDF ] [DATA]
  
  

• Training Structured Prediction Models with Extrinsic Loss Functions
  K. Hall, R. McDonald and S. Petrov
  Domain Adaptation Workshop at NIPS 2011
  Note: This is an extension of the Hall et al. EMNLP 2011 paper.
  [PDF]
  
  
• Training dependency parsers by jointly optimizing multiple objectives
  K. Hall, R. McDonald, J. Katz-Brown and M. Ringgaard
  Empirical Methods in Natural Language Processing (EMNLP), 2011
  [PDF]
  
  
• Multi-source Transfer of Delexicalized Dependency Parsers
  R. McDonald, S. Petrov and K. Hall
  Empirical Methods in Natural Language Processing (EMNLP), 2011
  [PDF]
  
  
• Training a Parser for Machine Translation Reordering
  J. Katz-Brown, S. Petrov, R. McDonald, D. Talbot, F. Och, H. Ichikawa, M. Seno and H. Kazawa
  Empirical Methods in Natural Language Processing (EMNLP), 2011
  [PDF]
  
  
• Semi-supervised Latent Variable Models for Sentence-level Sentiment Analysis
  O. Täckström and R. McDonald
  Association for Computational Linguistics (ACL), 2011
  [PDF] [DATA]
  
  
• Analyzing and Integrating Dependency Parsers
  R. McDonald and J. Nivre
  Computational Linguistics, 37:1, 2011
  [PDF]
  
  
• Discovering Fine-grained Sentiment with Latent Variable Structured Prediction Models
  O. Täckström and R. McDonald
  European Conference on Information Retrieval (ECIR), 2011
  Conference version: [PDF]
  Tech-report: [PDF] [HTML] [DATA]
  
  

• Evaluation of Dependency Parsers on Unbounded Dependencies
  J. Nivre, L. Rimell, R. McDonald and C. Gómez Rodríguez
  International Conference on Computational Linguistics (COLING), 2010.
  [PDF]
  
  
• Learning to Classify the Scope of Negation for Improved Sentiment Analysis
  I. Councill, R. McDonald and L. Velikovich
  Negation and Speculation in Natural Language Processing (NeSp-NLP), 2010
  [PDF]
  
  
• Distributed Training Strategies for the Structured Perceptron
  R. McDonald, K. Hall and G. Mann
  North American Association for Computational Linguistics (NAACL), 2010.
  [PDF]
  
  
• The Viability of Web-derived Polarity Lexicons
  L. Velikovich, S. Blair-Goldensohn, K. Hannan and R. McDonald
  North American Association for Computational Linguistics (NAACL), 2010.
  [PDF]
  
  

• Dependency Parsing
  S. Kübler, R. McDonald and J. Nivre
  Synthesis Lectures on Human Language Technologies, G. Hirst (ed.)
  Morgan & Claypool Publishers
  [e-print] [Amazon] [Google Books]
  
  
• Efficient Large-Scale Distributed Training of Conditional Maximum Entropy Models
  G. Mann, R. McDonald, M. Mohri, N. Silberman, and D. Walker
  Neural Information Processing Systems (NIPS), 2009.
  [PDF]
  
  
• Sentiment Summarization: Evaluating and Learning User Preferences
  K. Lerman, S. Blair-Goldensohn and R. McDonald
  European Association for Computational Linguistics (EACL), 2009.
  [PDF]
  
  
• Contrastive Summarization: An Experiment with Consumer Reviews
  K. Lerman and R. McDonald
  North American Association for Computational Linguistics (NAACL), 2009.
  [PDF]
  
  

• A Joint Model of Text and Aspect Ratings for Sentiment Summarization
  I. Titov and R. McDonald
  Association for Computational Linguistics (ACL), 2008.
  [PDF]
  
  
• Integrating Graph-based and Transition-based Dependency Parsers
  J. Nivre and R. McDonald
  Association for Computational Linguistics (ACL), 2008.
  [PDF]
  
  
• Building a Sentiment Summarizer for Local Service Reviews
  S. Blair-Goldensohn, K. Hannan, R. McDonald, T. Neylon, G. Reis, and J. Reynar
  WWW Workshop on NLP in the Information Explosion Era (NLPIX), 2008.
  [PDF]
  
  
• Modeling Online Reviews with Multi-Grain Topic Models
  I. Titov and R. McDonald
  International World Wide Web Conference (WWW), 2008.
  [PDF]
  
  

• The CoNLL 2007 Shared Task on Dependency Parsing
  J. Nivre, J. Hall, S. Kübler, R. McDonald, J. Nilsson, S. Riedel, and D. Yuret
  Empirical Methods in Natural Language Processing and Natural Language Learning (EMNLP-CoNLL), 2007.
  [PDF]
  
  
• Characterizing the Errors of Data-Driven Dependency Parsing Models
  R. McDonald and J. Nivre
  Empirical Methods in Natural Language Processing and Natural Language Learning (EMNLP-CoNLL), 2007.
  [PDF]
  
  
• On the Complexity of Non-Projective Data-Driven Dependency Parsing
  R. McDonald and G. Satta
  International Conference on Parsing Technologies (IWPT), 2007.
  [PDF]
  
  
• Structured Models for Fine-to-Coarse Sentiment Analysis
  R. McDonald, K. Hannan, T. Neylon, M. Wells, and J. Reynar
  Association for Computational Linguistics (ACL), 2007
  [PDF]
  
  
• A Study of Global Inference Algorithms in Multi-Document Summarization
  R. McDonald
  European Conference on Information Retrieval (ECIR), 2007
  [PDF]
  
  

• Automated recognition of malignancy mentions in biomedical literature
  Y. Jin, R. McDonald, K. Lerman, M. Mandel, S. Carroll, M. Liberman, F. Pereira, R. S. Winters and P. S. White
  BMC Bioinformatics 2006, 7:492
  [PDF]
  
  
• Domain Adaptation with Structural Correspondence Learning
  J. Blitzer and R. McDonald and F. Pereira
  Empirical Methods in Natural Language Processing (EMNLP), 2006
  [PDF]
  
  
• Multilingual Dependency Analysis with a Two-Stage Discriminative Parser
  R. McDonald and K. Lerman and F. Pereira
  Conference on Natural Language Learning (CoNLL), 2006
  [PDF]
  
  
• An automated procedure to identify biomedical articles that contain cancer-associated gene variants
  Ryan McDonald, R. Scott Winters, Claire K. Ankuda, Joan A. Murphy, Amy E. Rogers, Fernando Pereira, Marc S. Greenblatt, Peter S. White
  Human Mutation, Volume 27 Issue 9, 2006
  [PDF]
  
  
• Online Learning of Approximate Dependency Parsing Algorithms
  R. McDonald and F. Pereira
  European Association for Computational Linguistics (EACL), 2006
  [PDF]
  
  
• Discriminative Sentence Compression with Soft Syntactic Constraints
  R. McDonald
  European Association for Computational Linguistics (EACL), 2006
  [PDF]
  
  

• Non-Projective Dependency Parsing using Spanning Tree Algorithms
  R. McDonald, F. Pereira, K. Ribarov and J. Hajič
  Human Language Technologies and Empirical Methods in Natural Language Processing (HLT-EMNLP), 2005
  [Best Student Paper Award]
  [PDF]
  
  
• Flexible Text Segmentation with Structured Multilabel Classification
  R. McDonald, K. Crammer and F. Pereira
  Human Language Technologies and Empirical Methods in Natural Language Processing (HLT-EMNLP), 2005
  [PDF]
  
  
• Simple Algorithms for Complex Relation Extraction with Applications to Biomedical IE
  R. McDonald, F. Pereira, S. Kulick, S. Winters, Y. Jin and P. White
  Association for Computational Linguistics (ACL), 2005
  [PDF]
  
  
• Online Large-Margin Training of Dependency Parsers
  Ryan McDonald, Koby Crammer and Fernando Pereira
  Association for Computational Linguistics (ACL), 2005
  [PDF], or a more detailed and updated Tech Report
  
  
• Identifying and Extracting Malignancy Types in Cancer Literature
  Y. Jin, R. McDonald, K. Lerman, M. Mandel, M. Liberman, F. Pereira, R.S. Winters and P.S. White
  Linking Literature, Information and Knowledge for Biology (BioLink), 2005
  [PDF]
  
  
• Automatically annotating documents with normalized gene lists
  Jay Crim, Ryan McDonald and Fernando Pereira
  BMC Bioinformatics 2005, 6(Suppl 1):S13
  [PDF]
  
  
• Identifying gene and protein mentions in text using conditional random fields
  Ryan McDonald and Fernando Pereira
  BMC Bioinformatics 2005, 6(Suppl 1):S6
  [PDF]
  
  
• Spanning Tree Methods for Discriminative Training of Dependency Parsers
  Ryan McDonald, Koby Crammer and Fernando Pereira
  UPenn CIS Technical Report: MS-CIS-05-11
  [PDF]
  
  

• An entity tagger for recognizing acquired genomic variations in cancer literature
  R. McDonald, R.S. Winters, M. Mandel, Y. Jin, P.S. White and F. Pereira
  Journal of Bioinformatics, 2004.
  [PDF]
  
  
• Integrated Annotation for Biomedical Information Extraction
  S. Kulick, A. Bies, M. Liberman, M. Mandel, R. McDonald, M. Palmer, A. Schein, L. Ungar, S. Winters and P. White
  Linking Biological Literature, Ontologies and Databases (BioLink), 2004
  [PDF]
  
  
• New Large Margin Algorithms for Structure Prediction
  Koby Crammer, Ryan McDonald and Fernando Pereira
  NIPS Workshop on Learning With Structured Outputs, 2004
  
  
• Scalable Large Margin Online Learning Algorithms for Structured Classification
  Ryan McDonald, Koby Crammer and Fernando Pereira
  NIPS Workshop on Learning With Structured Outputs, 2004
  
  
• Extracting Relations from Unstructured Text
  Ryan McDonald
  My WPEII review paper for admission to PhD candidacy, 2004.
  UPenn CIS Technical Report: MS-CIS-05-06
  [PDF]
  
  
• Automatically Annotating Documents with Normalized Gene Lists
  Jay Crim, Ryan McDonald and Fernando Pereira
  A critical assessment of text mining methods in molecular biology, BioCreative, 2004
  [PDF]
  
  
• Identifying Gene and Protein Mentions in Text Using Conditional Random Fields
  Ryan McDonald and Fernando Pereira
  A critical assessment of text mining methods in molecular biology, BioCreative, 2004
  [PDF]
  
  

• Exploiting Sequent Structure in Membership Algorithms for the Lambek Calculus
  Ryan McDonald
  15th Annual European Summer School in Logic Language and Information (ESSLLI), 2003
  [PDF]
  
  
• Flexible Web Document Analysis for Delivery to Narrow-Bandwidth Devices
  Gerald Penn, Jianying Hu, Hengbin Luo and Ryan McDonald
  International Conference on Document Analysis and Recognition (ICDAR), 2001
  [PDF]
• A Distributed Social MUD to Enhance Reliability and Scalability
  Ryan McDonald and Nick Montfort, 2003.
  Unpublished
  [PDF]
  
  

Note: I try to answer emails about my software, in particular for MSTParser. However, time constraints limit the amount of requests I can manage.

• Universal Dependency Treebanks
  Multilingual treebanks annotated/converted in a harmonized scheme.
  
  
• MSTParser
  Implementation of parsers described in ACL and HLT-EMNLP '05 papers.
  • See the new SourceForge page
    
    
• StructLearn
  General online structured learning package.
  
  
• BioTagger
  Conditional Random Field Biomedical Entity Tagger (Genes, Variations and Malignancies). This tagger (or variants of it) form part of the core technology of the following resources:
  • FABLE biomedical literature search engine
  • PlasmoDB relevant literature search
    
    
• MALLET
  In the past I have been known to contribute to MALLET,
  which is a general implementation of Conditional Random Fields
  and other learning algorithms tailored specifically to language.
  Andrew McCallum is the primary writer and caretaker of the package
  which is available at http://mallet.cs.umass.edu

• Classification
  Summer 2014
  Lecture at the 1st Athens NLP Summer School
  Course materials: [SlidesF][Video]
  
  
• Introduction to Machine Learning
  Summer 2014
  Lecture at the 4th Lisbon Machine Learning School
  Course materials: [PDF]
  
  
• Recent Advances in Dependency Parsing
  Spring 2014
  Tutorial at EACL 2014
  Course materials: [HTML]
  
  
• Generalized Linear Classifiers in NLP
  Fall 2009
  Guest lecture for Machine Learning at the GSLT
  Course materials: [HTML]
  
  
• Generalized Linear Classifiers in NLP
  Fall 2007
  Guest lecture for Machine Learning at the GSLT
  Course materials: [HTML]
  
  
• Data-Driven Dependency Parsing
  Summer 2007
  At ESSLLI 2007
  Course materials: [HTML]
  
  
• Probabilistic Parsing
  Spring 2005
  Guest lectures for CIS 620 at the University of Pennsylvania
  Course materials: [PDF]

• Walking Brooklyn (Aug 2009)
• Walking Manhattan (Aug 2008)